Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASCL1 | ISL1 | ENSNLEP00000027743 | ENSNLEP00000013061 | Achaete-scute family bHLH transcription factor 1. | ISL LIM homeobox 1. | 0.541 |
ASCL1 | PHOX2A | ENSNLEP00000027743 | ENSNLEP00000033915 | Achaete-scute family bHLH transcription factor 1. | Homeobox domain-containing protein. | 0.696 |
ASCL1 | RET | ENSNLEP00000027743 | ENSNLEP00000019224 | Achaete-scute family bHLH transcription factor 1. | Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. | 0.462 |
DBH | PHOX2A | ENSNLEP00000016172 | ENSNLEP00000033915 | Dopamine beta-hydroxylase. | Homeobox domain-containing protein. | 0.701 |
DBH | TH | ENSNLEP00000016172 | ENSNLEP00000044629 | Dopamine beta-hydroxylase. | Tyrosine hydroxylase. | 0.794 |
HAND2 | ISL1 | ENSNLEP00000008116 | ENSNLEP00000013061 | Heart and neural crest derivatives expressed 2. | ISL LIM homeobox 1. | 0.641 |
HAND2 | PHOX2A | ENSNLEP00000008116 | ENSNLEP00000033915 | Heart and neural crest derivatives expressed 2. | Homeobox domain-containing protein. | 0.540 |
INPPL1 | PHOX2A | ENSNLEP00000037879 | ENSNLEP00000033915 | Inositol polyphosphate phosphatase like 1. | Homeobox domain-containing protein. | 0.471 |
ISL1 | ASCL1 | ENSNLEP00000013061 | ENSNLEP00000027743 | ISL LIM homeobox 1. | Achaete-scute family bHLH transcription factor 1. | 0.541 |
ISL1 | HAND2 | ENSNLEP00000013061 | ENSNLEP00000008116 | ISL LIM homeobox 1. | Heart and neural crest derivatives expressed 2. | 0.641 |
ISL1 | PHOX2A | ENSNLEP00000013061 | ENSNLEP00000033915 | ISL LIM homeobox 1. | Homeobox domain-containing protein. | 0.489 |
KIF21A | PHOX2A | ENSNLEP00000043357 | ENSNLEP00000033915 | Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Homeobox domain-containing protein. | 0.765 |
NR2F6 | PHOX2A | ENSNLEP00000045325 | ENSNLEP00000033915 | Nuclear receptor subfamily 2 group F member 6. | Homeobox domain-containing protein. | 0.487 |
PHOX2A | ASCL1 | ENSNLEP00000033915 | ENSNLEP00000027743 | Homeobox domain-containing protein. | Achaete-scute family bHLH transcription factor 1. | 0.696 |
PHOX2A | DBH | ENSNLEP00000033915 | ENSNLEP00000016172 | Homeobox domain-containing protein. | Dopamine beta-hydroxylase. | 0.701 |
PHOX2A | HAND2 | ENSNLEP00000033915 | ENSNLEP00000008116 | Homeobox domain-containing protein. | Heart and neural crest derivatives expressed 2. | 0.540 |
PHOX2A | INPPL1 | ENSNLEP00000033915 | ENSNLEP00000037879 | Homeobox domain-containing protein. | Inositol polyphosphate phosphatase like 1. | 0.471 |
PHOX2A | ISL1 | ENSNLEP00000033915 | ENSNLEP00000013061 | Homeobox domain-containing protein. | ISL LIM homeobox 1. | 0.489 |
PHOX2A | KIF21A | ENSNLEP00000033915 | ENSNLEP00000043357 | Homeobox domain-containing protein. | Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.765 |
PHOX2A | NR2F6 | ENSNLEP00000033915 | ENSNLEP00000045325 | Homeobox domain-containing protein. | Nuclear receptor subfamily 2 group F member 6. | 0.487 |
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