Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSDE1Cold shock domain containing E1. (844 aa)    
Predicted Functional Partners:
ENSNLEP00000031295
WD_REPEATS_REGION domain-containing protein.
   
 
 0.846
LOC100582696
Uncharacterized protein.
   
 
 0.846
STRAP
Serine/threonine kinase receptor associated protein.
   
 
 0.846
PAIP1
Poly(A) binding protein interacting protein 1.
   
 0.814
YBX1
Y-box binding protein 1.
   
 0.788
LOC100585733
Uncharacterized protein.
   
 
 0.770
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.770
PRRC2C
Proline rich coiled-coil 2C.
   
 
 0.762
RASA1
RAS p21 protein activator 1.
   
 0.757
EIF4H
Eukaryotic translation initiation factor 4H.
   
 0.757
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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