Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A183K9H2 | A0A183KDQ0 | A0A183K9H2 | A0A183KDQ0 | Helicase ATP-binding domain-containing protein. | SF3b1 domain-containing protein. | 0.723 |
A0A183K9H2 | A0A183KLI0 | A0A183K9H2 | A0A183KLI0 | Helicase ATP-binding domain-containing protein. | CBFD_NFYB_HMF domain-containing protein. | 0.691 |
A0A183K9H2 | A0A183KWN4 | A0A183K9H2 | A0A183KWN4 | Helicase ATP-binding domain-containing protein. | CBFD_NFYB_HMF domain-containing protein. | 0.960 |
A0A183K9H2 | SCUD_LOCUS11 | A0A183K9H2 | A0A183JBF6 | Helicase ATP-binding domain-containing protein. | Uncharacterized protein. | 0.874 |
A0A183K9H2 | SCUD_LOCUS2411 | A0A183K9H2 | A0A183KLC5 | Helicase ATP-binding domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.974 |
A0A183K9H2 | SCUD_LOCUS309 | A0A183K9H2 | A0A183JCA2 | Helicase ATP-binding domain-containing protein. | SAP domain-containing protein. | 0.722 |
A0A183K9H2 | SCUD_LOCUS8595 | A0A183K9H2 | A0A183K0T2 | Helicase ATP-binding domain-containing protein. | Uncharacterized protein. | 0.858 |
A0A183K9H2 | SCUD_LOCUS9935 | A0A183K9H2 | A0A183K4L5 | Helicase ATP-binding domain-containing protein. | Histone H2B; Belongs to the histone H2B family. | 0.959 |
A0A183KDQ0 | A0A183K9H2 | A0A183KDQ0 | A0A183K9H2 | SF3b1 domain-containing protein. | Helicase ATP-binding domain-containing protein. | 0.723 |
A0A183KDQ0 | SCUD_LOCUS1017 | A0A183KDQ0 | A0A183JEA4 | SF3b1 domain-containing protein. | Uncharacterized protein. | 0.942 |
A0A183KDQ0 | SCUD_LOCUS11 | A0A183KDQ0 | A0A183JBF6 | SF3b1 domain-containing protein. | Uncharacterized protein. | 0.742 |
A0A183KDQ0 | SCUD_LOCUS2411 | A0A183KDQ0 | A0A183KLC5 | SF3b1 domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.685 |
A0A183KDQ0 | SCUD_LOCUS309 | A0A183KDQ0 | A0A183JCA2 | SF3b1 domain-containing protein. | SAP domain-containing protein. | 0.966 |
A0A183KDQ0 | SCUD_LOCUS7207 | A0A183KDQ0 | A0A183JWW2 | SF3b1 domain-containing protein. | HSA domain-containing protein. | 0.723 |
A0A183KDQ0 | SCUD_LOCUS8595 | A0A183KDQ0 | A0A183K0T2 | SF3b1 domain-containing protein. | Uncharacterized protein. | 0.723 |
A0A183KLI0 | A0A183K9H2 | A0A183KLI0 | A0A183K9H2 | CBFD_NFYB_HMF domain-containing protein. | Helicase ATP-binding domain-containing protein. | 0.691 |
A0A183KLI0 | A0A183KWN4 | A0A183KLI0 | A0A183KWN4 | CBFD_NFYB_HMF domain-containing protein. | CBFD_NFYB_HMF domain-containing protein. | 0.994 |
A0A183KLI0 | SCUD_LOCUS1017 | A0A183KLI0 | A0A183JEA4 | CBFD_NFYB_HMF domain-containing protein. | Uncharacterized protein. | 0.972 |
A0A183KLI0 | SCUD_LOCUS11 | A0A183KLI0 | A0A183JBF6 | CBFD_NFYB_HMF domain-containing protein. | Uncharacterized protein. | 0.799 |
A0A183KLI0 | SCUD_LOCUS7207 | A0A183KLI0 | A0A183JWW2 | CBFD_NFYB_HMF domain-containing protein. | HSA domain-containing protein. | 0.691 |
page 1 of 5