Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCUD_LOCUS213Uncharacterized protein. (1529 aa)    
Predicted Functional Partners:
SCUD_LOCUS9310
Protein kinase domain-containing protein.
    
 0.807
A0A183K6K9
Uncharacterized protein; Belongs to the NDK family.
   
 
 0.710
A0A183L0C5
Uncharacterized protein.
    
 
 0.693
SCUD_LOCUS556
DUF667 domain-containing protein.
   
 0.682
A0A183KDL1
Uncharacterized protein.
   
 0.682
A0A183JEU1
RING-type domain-containing protein.
    
 0.654
SCUD_LOCUS3311
RING-type domain-containing protein.
    
 0.654
SCUD_LOCUS9644
Uncharacterized protein.
    
 0.654
A0A183JPP2
Uncharacterized protein.
    
 
 0.617
SCUD_LOCUS4348
Ribosomal_S5_C domain-containing protein.
    
 
 0.605
Your Current Organism:
Schistosoma curassoni
NCBI taxonomy Id: 6186
Other names: S. curassoni
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