STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCUD_LOCUS321DNA ligase. (1095 aa)    
Predicted Functional Partners:
SCUD_LOCUS2421
Uncharacterized protein.
   
 0.990
SCUD_LOCUS3338
Ku_N domain-containing protein.
   
 0.990
A0A183KJ61
Ku domain-containing protein.
   
 0.989
A0A183KNY2
Ku domain-containing protein.
   
 0.989
A0A183K5K8
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.988
A0A183KNY3
Ku_C domain-containing protein.
   
 0.986
SCUD_LOCUS1247
Uncharacterized protein.
   
 0.961
A0A183KXU7
BRCT domain-containing protein.
   
 0.961
SCUD_LOCUS3579
Uncharacterized protein.
    
 0.956
SCUD_LOCUS5725
Uncharacterized protein.
    
 0.956
Your Current Organism:
Schistosoma curassoni
NCBI taxonomy Id: 6186
Other names: S. curassoni
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