STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCUD_LOCUS1241Uncharacterized protein. (308 aa)    
Predicted Functional Partners:
SCUD_LOCUS7687
NAD(P)-bd_dom domain-containing protein.
   
 
  0.565
SCUD_LOCUS7852
Uncharacterized protein.
   
 
  0.565
A0A183KE37
Epimerase domain-containing protein.
   
 
  0.565
A0A183KRH7
NAD(P)-bd_dom domain-containing protein.
   
 
  0.565
A0A183L5V1
Epimerase domain-containing protein.
   
 
  0.565
SCUD_LOCUS4
Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.
    
 
 0.533
A0A183K9M3
Uncharacterized protein.
      
 0.478
SCUD_LOCUS7286
HTH psq-type domain-containing protein.
      
 0.468
SCUD_LOCUS9905
Aspartate aminotransferase.
   
 
  0.463
SCUD_LOCUS5426
N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
   
  
 0.450
Your Current Organism:
Schistosoma curassoni
NCBI taxonomy Id: 6186
Other names: S. curassoni
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