Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCUD_LOCUS1547Uncharacterized protein. (264 aa)    
Predicted Functional Partners:
SCUD_LOCUS8255
LSDAT_euk domain-containing protein.
 
  
 0.927
SCUD_LOCUS6956
Pribosyltran_N domain-containing protein.
     
 0.869
A0A183KKP2
Ion_trans domain-containing protein.
 
  
 0.849
SCUD_LOCUS6529
Uncharacterized protein.
     
 0.848
SCUD_LOCUS2741
Uncharacterized protein; Belongs to the phosphohexose mutase family.
     
 0.838
A0A183KF66
Uncharacterized protein.
     
 0.838
SCUD_LOCUS1654
PGM_PMM_I domain-containing protein.
     
  0.816
SCUD_LOCUS1722
PGM_PMM_IV domain-containing protein.
     
  0.816
SCUD_LOCUS4552
Uncharacterized protein.
     
  0.816
SCUD_LOCUS887
Uncharacterized protein.
    
 0.813
Your Current Organism:
Schistosoma curassoni
NCBI taxonomy Id: 6186
Other names: S. curassoni
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