SCUD_LOCUS3491 protein (Schistosoma curassoni)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

SCUD_LOCUS3491

Uncharacterized protein. (90 aa)

Predicted Functional Partners:

A0A183KQ80

0.839

SCUD_LOCUS6966

0.834

SCUD_LOCUS1281

0.792

SCUD_LOCUS2008

0.792

SCUD_LOCUS2208

0.792

A0A183KGP6

0.792

A0A183KMY2

0.792

SCUD_LOCUS8807

0.785

SCUD_LOCUS3715

0.730

A0A183KDW8

0.721

Your Current Organism:

Schistosoma curassoni

NCBI taxonomy Id: 6186
Other names: S. curassoni

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183KDW8	SCUD_LOCUS3491	A0A183KDW8	A0A183JLB0	GOLD domain-containing protein.	Uncharacterized protein.	0.721
A0A183KDW8	SCUD_LOCUS8807	A0A183KDW8	A0A183K1E4	GOLD domain-containing protein.	TPR_REGION domain-containing protein.	0.716
A0A183KGP6	A0A183KQ80	A0A183KGP6	A0A183KQ80	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A183KGP6	SCUD_LOCUS3491	A0A183KGP6	A0A183JLB0	Uncharacterized protein.	Uncharacterized protein.	0.792
A0A183KGP6	SCUD_LOCUS3715	A0A183KGP6	A0A183JLY4	Uncharacterized protein.	RING-type domain-containing protein.	0.536
A0A183KMY2	A0A183KQ80	A0A183KMY2	A0A183KQ80	UBX domain-containing protein.	Uncharacterized protein.	0.862
A0A183KMY2	SCUD_LOCUS2008	A0A183KMY2	A0A183JH35	UBX domain-containing protein.	UAS domain-containing protein.	0.690
A0A183KMY2	SCUD_LOCUS3491	A0A183KMY2	A0A183JLB0	UBX domain-containing protein.	Uncharacterized protein.	0.792
A0A183KMY2	SCUD_LOCUS3715	A0A183KMY2	A0A183JLY4	UBX domain-containing protein.	RING-type domain-containing protein.	0.536
A0A183KQ80	A0A183KGP6	A0A183KQ80	A0A183KGP6	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A183KQ80	A0A183KMY2	A0A183KQ80	A0A183KMY2	Uncharacterized protein.	UBX domain-containing protein.	0.862
A0A183KQ80	SCUD_LOCUS1281	A0A183KQ80	A0A183JF17	Uncharacterized protein.	UBX domain-containing protein.	0.932
A0A183KQ80	SCUD_LOCUS2008	A0A183KQ80	A0A183JH35	Uncharacterized protein.	UAS domain-containing protein.	0.862
A0A183KQ80	SCUD_LOCUS2208	A0A183KQ80	A0A183JHN4	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A183KQ80	SCUD_LOCUS3491	A0A183KQ80	A0A183JLB0	Uncharacterized protein.	Uncharacterized protein.	0.839
A0A183KQ80	SCUD_LOCUS3715	A0A183KQ80	A0A183JLY4	Uncharacterized protein.	RING-type domain-containing protein.	0.793
SCUD_LOCUS1281	A0A183KQ80	A0A183JF17	A0A183KQ80	UBX domain-containing protein.	Uncharacterized protein.	0.932
SCUD_LOCUS1281	SCUD_LOCUS3491	A0A183JF17	A0A183JLB0	UBX domain-containing protein.	Uncharacterized protein.	0.792
SCUD_LOCUS1281	SCUD_LOCUS3715	A0A183JF17	A0A183JLY4	UBX domain-containing protein.	RING-type domain-containing protein.	0.536
SCUD_LOCUS2008	A0A183KMY2	A0A183JH35	A0A183KMY2	UAS domain-containing protein.	UBX domain-containing protein.	0.690