STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCUD_LOCUS4025Uncharacterized protein. (230 aa)    
Predicted Functional Partners:
SCUD_LOCUS6792
Poly [ADP-ribose] polymerase.
    
 
 0.875
A0A183KU87
Uncharacterized protein.
    
 
 0.875
A0A183KXP0
Poly [ADP-ribose] polymerase.
    
 
 0.875
A0A183KYV7
Poly [ADP-ribose] polymerase.
    
 
 0.875
SCUD_LOCUS4432
PARP-type domain-containing protein.
    
 
 0.830
SCUD_LOCUS9935
Histone H2B; Belongs to the histone H2B family.
    
   0.660
SCUD_LOCUS8647
MI domain-containing protein.
      
 0.573
SCUD_LOCUS2411
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
   0.556
SCUD_LOCUS5774
Histone H3; Belongs to the histone H3 family.
    
 
 0.514
A0A183K9V4
Histone domain-containing protein.
    
 
 0.514
Your Current Organism:
Schistosoma curassoni
NCBI taxonomy Id: 6186
Other names: S. curassoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.