SCUD_LOCUS5322 protein (Schistosoma curassoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

SCUD_LOCUS5322

PfkB domain-containing protein. (307 aa)

Predicted Functional Partners:

A0A183KTR4

0.993

SCUD_LOCUS2671

0.988

SCUD_LOCUS164

0.972

A0A183KLQ0

0.972

A0A183L4Z6

0.956

A0A183KKV2

0.953

A0A183KPI2

0.948

A0A183KR98

0.948

A0A183L2C4

0.938

SCUD_LOCUS7228

0.934

Your Current Organism:

Schistosoma curassoni

NCBI taxonomy Id: 6186
Other names: S. curassoni

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183KKV2	A0A183KLQ0	A0A183KKV2	A0A183KLQ0	Uncharacterized protein; Belongs to the adenylate kinase family.	Lyase_1 domain-containing protein.	0.886
A0A183KKV2	A0A183KPI2	A0A183KKV2	A0A183KPI2	Uncharacterized protein; Belongs to the adenylate kinase family.	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	0.445
A0A183KKV2	A0A183KR98	A0A183KKV2	A0A183KR98	Uncharacterized protein; Belongs to the adenylate kinase family.	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	0.445
A0A183KKV2	A0A183KTR4	A0A183KKV2	A0A183KTR4	Uncharacterized protein; Belongs to the adenylate kinase family.	Pribosyltran domain-containing protein.	0.905
A0A183KKV2	A0A183L4Z6	A0A183KKV2	A0A183L4Z6	Uncharacterized protein; Belongs to the adenylate kinase family.	Uncharacterized protein.	0.945
A0A183KKV2	SCUD_LOCUS164	A0A183KKV2	A0A183JBV7	Uncharacterized protein; Belongs to the adenylate kinase family.	ADSL_C domain-containing protein.	0.886
A0A183KKV2	SCUD_LOCUS5322	A0A183KKV2	A0A183JRI3	Uncharacterized protein; Belongs to the adenylate kinase family.	PfkB domain-containing protein.	0.953
A0A183KLQ0	A0A183KKV2	A0A183KLQ0	A0A183KKV2	Lyase_1 domain-containing protein.	Uncharacterized protein; Belongs to the adenylate kinase family.	0.886
A0A183KLQ0	A0A183KPI2	A0A183KLQ0	A0A183KPI2	Lyase_1 domain-containing protein.	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	0.479
A0A183KLQ0	A0A183KR98	A0A183KLQ0	A0A183KR98	Lyase_1 domain-containing protein.	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	0.479
A0A183KLQ0	A0A183KTR4	A0A183KLQ0	A0A183KTR4	Lyase_1 domain-containing protein.	Pribosyltran domain-containing protein.	0.990
A0A183KLQ0	A0A183L2C4	A0A183KLQ0	A0A183L2C4	Lyase_1 domain-containing protein.	Uncharacterized protein.	0.702
A0A183KLQ0	A0A183L4Z6	A0A183KLQ0	A0A183L4Z6	Lyase_1 domain-containing protein.	Uncharacterized protein.	0.953
A0A183KLQ0	SCUD_LOCUS164	A0A183KLQ0	A0A183JBV7	Lyase_1 domain-containing protein.	ADSL_C domain-containing protein.	0.698
A0A183KLQ0	SCUD_LOCUS2671	A0A183KLQ0	A0A183JIZ6	Lyase_1 domain-containing protein.	A_deaminase domain-containing protein.	0.741
A0A183KLQ0	SCUD_LOCUS5322	A0A183KLQ0	A0A183JRI3	Lyase_1 domain-containing protein.	PfkB domain-containing protein.	0.972
A0A183KPI2	A0A183KKV2	A0A183KPI2	A0A183KKV2	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	Uncharacterized protein; Belongs to the adenylate kinase family.	0.445
A0A183KPI2	A0A183KLQ0	A0A183KPI2	A0A183KLQ0	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	Lyase_1 domain-containing protein.	0.479
A0A183KPI2	A0A183KR98	A0A183KPI2	A0A183KR98	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	0.888
A0A183KPI2	A0A183KTR4	A0A183KPI2	A0A183KTR4	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.	Pribosyltran domain-containing protein.	0.966