STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCUD_LOCUS5503Uncharacterized protein. (276 aa)    
Predicted Functional Partners:
SCUD_LOCUS599
Uncharacterized protein.
   
 0.921
A0A183KHX9
Uncharacterized protein.
   
 0.921
A0A183KGG2
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.835
SCUD_LOCUS2324
NIBRIN_BRCT_II domain-containing protein.
    
 0.817
SCUD_LOCUS1055
Uncharacterized protein.
   
 0.801
A0A183KUM2
Uncharacterized protein.
   
 0.801
SCUD_LOCUS1760
BRCT domain-containing protein.
    
 0.787
A0A183KJ35
Uncharacterized protein.
    
 0.787
A0A183JUU0
RECA_2 domain-containing protein.
   
 0.715
A0A183L6P0
RECA_2 domain-containing protein.
   
 0.715
Your Current Organism:
Schistosoma curassoni
NCBI taxonomy Id: 6186
Other names: S. curassoni
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