SCUD_LOCUS5511 protein (Schistosoma curassoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

SCUD_LOCUS5511

Uncharacterized protein. (93 aa)

Predicted Functional Partners:

A0A183K9U7

0.983

SCUD_LOCUS307

0.880

SCUD_LOCUS5062

0.866

A0A183KG17

0.861

A0A183K8Y3

0.856

A0A183L1Y1

0.844

A0A183K5G2

0.840

A0A183KGR7

0.840

A0A183KAV2

0.814

A0A183KKJ4

0.814

Your Current Organism:

Schistosoma curassoni

NCBI taxonomy Id: 6186
Other names: S. curassoni

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183K5G2	A0A183K8Y3	A0A183K5G2	A0A183K8Y3	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	Uncharacterized protein.	0.910
A0A183K5G2	A0A183KAV2	A0A183K5G2	A0A183KAV2	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	RRM domain-containing protein.	0.857
A0A183K5G2	A0A183KG17	A0A183K5G2	A0A183KG17	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	MYND-type domain-containing protein.	0.903
A0A183K5G2	A0A183KGR7	A0A183K5G2	A0A183KGR7	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	Uncharacterized protein.	0.503
A0A183K5G2	A0A183KKJ4	A0A183K5G2	A0A183KKJ4	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	Histone-lysine N-methyltransferase.	0.857
A0A183K5G2	A0A183L1Y1	A0A183K5G2	A0A183L1Y1	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	Tr-type G domain-containing protein.	0.869
A0A183K5G2	SCUD_LOCUS307	A0A183K5G2	A0A183JCA0	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	Uncharacterized protein.	0.868
A0A183K5G2	SCUD_LOCUS5062	A0A183K5G2	A0A183JQS3	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	Uncharacterized protein.	0.931
A0A183K5G2	SCUD_LOCUS5511	A0A183K5G2	A0A183JS22	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	Uncharacterized protein.	0.840
A0A183K8Y3	A0A183K5G2	A0A183K8Y3	A0A183K5G2	Uncharacterized protein.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.910
A0A183K8Y3	A0A183KAV2	A0A183K8Y3	A0A183KAV2	Uncharacterized protein.	RRM domain-containing protein.	0.887
A0A183K8Y3	A0A183KG17	A0A183K8Y3	A0A183KG17	Uncharacterized protein.	MYND-type domain-containing protein.	0.911
A0A183K8Y3	A0A183KGR7	A0A183K8Y3	A0A183KGR7	Uncharacterized protein.	Uncharacterized protein.	0.910
A0A183K8Y3	A0A183KKJ4	A0A183K8Y3	A0A183KKJ4	Uncharacterized protein.	Histone-lysine N-methyltransferase.	0.887
A0A183K8Y3	A0A183L1Y1	A0A183K8Y3	A0A183L1Y1	Uncharacterized protein.	Tr-type G domain-containing protein.	0.838
A0A183K8Y3	SCUD_LOCUS307	A0A183K8Y3	A0A183JCA0	Uncharacterized protein.	Uncharacterized protein.	0.921
A0A183K8Y3	SCUD_LOCUS5062	A0A183K8Y3	A0A183JQS3	Uncharacterized protein.	Uncharacterized protein.	0.955
A0A183K8Y3	SCUD_LOCUS5511	A0A183K8Y3	A0A183JS22	Uncharacterized protein.	Uncharacterized protein.	0.856
A0A183K9U7	SCUD_LOCUS5511	A0A183K9U7	A0A183JS22	Uncharacterized protein.	Uncharacterized protein.	0.983
A0A183KAV2	A0A183K5G2	A0A183KAV2	A0A183K5G2	RRM domain-containing protein.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.857