STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCUD_LOCUS5530Uncharacterized protein. (145 aa)    
Predicted Functional Partners:
A0A183KXX1
Uncharacterized protein.
  
 0.984
SCUD_LOCUS6981
Uncharacterized protein.
   
 0.982
A0A183KEX5
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 0.982
SCUD_LOCUS9466
TFIIS-type domain-containing protein.
   
 0.981
A0A183KBE2
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.981
SCUD_LOCUS4879
RPOLD domain-containing protein.
 
 0.980
SCUD_LOCUS1320
RNA_pol_Rpb1_5 domain-containing protein.
  
 0.977
SCUD_LOCUS5699
RNA_pol_Rpb1_3 domain-containing protein.
  
 0.977
SCUD_LOCUS5710
RPOLA_N domain-containing protein.
  
 0.977
SCUD_LOCUS6288
Uncharacterized protein.
  
 0.977
Your Current Organism:
Schistosoma curassoni
NCBI taxonomy Id: 6186
Other names: S. curassoni
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