SCUD_LOCUS5565 protein (Schistosoma curassoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

SCUD_LOCUS5565

Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (163 aa)

Predicted Functional Partners:

SCUD_LOCUS4137

0.939

A0A183KFI2

0.935

A0A183KYT4

0.935

SCUD_LOCUS1764

0.933

SCUD_LOCUS5428

0.919

A0A183KXF9

0.913

A0A183L4X1

0.913

SCUD_LOCUS5048

0.897

A0A183JI23

0.740

A0A183KQG9

0.736

Your Current Organism:

Schistosoma curassoni

NCBI taxonomy Id: 6186
Other names: S. curassoni

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183JI23	A0A183KFI2	A0A183JI23	A0A183KFI2	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Fzo_mitofusin domain-containing protein.	0.614
A0A183JI23	A0A183KQG9	A0A183JI23	A0A183KQG9	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Rhomboid domain-containing protein.	0.635
A0A183JI23	A0A183KXF9	A0A183JI23	A0A183KXF9	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.614
A0A183JI23	A0A183KYT4	A0A183JI23	A0A183KYT4	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Uncharacterized protein.	0.614
A0A183JI23	A0A183L4X1	A0A183JI23	A0A183L4X1	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Uncharacterized protein.	0.614
A0A183JI23	SCUD_LOCUS1764	A0A183JI23	A0A183JGE3	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Protein kinase domain-containing protein.	0.808
A0A183JI23	SCUD_LOCUS4137	A0A183JI23	A0A183JN52	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.740
A0A183JI23	SCUD_LOCUS5565	A0A183JI23	A0A183JS76	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.740
A0A183KFI2	A0A183JI23	A0A183KFI2	A0A183JI23	Fzo_mitofusin domain-containing protein.	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.614
A0A183KFI2	A0A183KQG9	A0A183KFI2	A0A183KQG9	Fzo_mitofusin domain-containing protein.	Rhomboid domain-containing protein.	0.647
A0A183KFI2	A0A183KXF9	A0A183KFI2	A0A183KXF9	Fzo_mitofusin domain-containing protein.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.806
A0A183KFI2	A0A183KYT4	A0A183KFI2	A0A183KYT4	Fzo_mitofusin domain-containing protein.	Uncharacterized protein.	0.842
A0A183KFI2	SCUD_LOCUS1764	A0A183KFI2	A0A183JGE3	Fzo_mitofusin domain-containing protein.	Protein kinase domain-containing protein.	0.956
A0A183KFI2	SCUD_LOCUS4137	A0A183KFI2	A0A183JN52	Fzo_mitofusin domain-containing protein.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.935
A0A183KFI2	SCUD_LOCUS5048	A0A183KFI2	A0A183JQR0	Fzo_mitofusin domain-containing protein.	zf-RING_14 domain-containing protein.	0.983
A0A183KFI2	SCUD_LOCUS5428	A0A183KFI2	A0A183JRT9	Fzo_mitofusin domain-containing protein.	Protein kinase domain-containing protein.	0.919
A0A183KFI2	SCUD_LOCUS5565	A0A183KFI2	A0A183JS76	Fzo_mitofusin domain-containing protein.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.935
A0A183KQG9	A0A183JI23	A0A183KQG9	A0A183JI23	Rhomboid domain-containing protein.	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.635
A0A183KQG9	A0A183KFI2	A0A183KQG9	A0A183KFI2	Rhomboid domain-containing protein.	Fzo_mitofusin domain-containing protein.	0.647
A0A183KQG9	A0A183KXF9	A0A183KQG9	A0A183KXF9	Rhomboid domain-containing protein.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.647