STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCUD_LOCUS5653Uncharacterized protein. (276 aa)    
Predicted Functional Partners:
SCUD_LOCUS7406
Uncharacterized protein.
   
 
 0.956
SCUD_LOCUS7441
TPT domain-containing protein.
      
 0.704
A0A183KZC7
Uncharacterized protein.
    
 0.689
A0A183KYP1
Uncharacterized protein.
      
 0.635
SCUD_LOCUS1388
Probable ribosome biogenesis protein SCUD_LOCUS1388; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.615
SCUD_LOCUS6205
NAD(P)-bd_dom domain-containing protein.
      
 0.594
A0A183KBA7
TPT domain-containing protein.
      
 0.593
SCUD_LOCUS2707
Uncharacterized protein.
     
  0.574
A0A183K5V7
HIT-type domain-containing protein.
     
  0.574
SCUD_LOCUS9301
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
      
 0.511
Your Current Organism:
Schistosoma curassoni
NCBI taxonomy Id: 6186
Other names: S. curassoni
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