SCUD_LOCUS5658 protein (Schistosoma curassoni)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

SCUD_LOCUS5658

Uncharacterized protein. (166 aa)

Predicted Functional Partners:

A0A183KGN2

0.996

A0A183KGA9

0.993

SCUD_LOCUS5434

0.981

SCUD_LOCUS312

0.979

A0A183KIV8

0.979

A0A183KAH1

0.970

SCUD_LOCUS206

0.943

SCUD_LOCUS521

0.943

A0A183KIU1

0.942

SCUD_LOCUS4326

0.939

Your Current Organism:

Schistosoma curassoni

NCBI taxonomy Id: 6186
Other names: S. curassoni

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183KAH1	A0A183KGA9	A0A183KAH1	A0A183KGA9	AAA domain-containing protein.	Uncharacterized protein.	0.993
A0A183KAH1	A0A183KGN2	A0A183KAH1	A0A183KGN2	AAA domain-containing protein.	Checkpoint protein; Belongs to the HUS1 family.	0.989
A0A183KAH1	A0A183KIU1	A0A183KAH1	A0A183KIU1	AAA domain-containing protein.	Uncharacterized protein.	0.999
A0A183KAH1	A0A183KIV8	A0A183KAH1	A0A183KIV8	AAA domain-containing protein.	Uncharacterized protein.	0.984
A0A183KAH1	SCUD_LOCUS206	A0A183KAH1	A0A183JBZ9	AAA domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.884
A0A183KAH1	SCUD_LOCUS312	A0A183KAH1	A0A183JCA5	AAA domain-containing protein.	Uncharacterized protein.	0.984
A0A183KAH1	SCUD_LOCUS4326	A0A183KAH1	A0A183JNN9	AAA domain-containing protein.	Uncharacterized protein.	0.849
A0A183KAH1	SCUD_LOCUS521	A0A183KAH1	A0A183JCW3	AAA domain-containing protein.	Uncharacterized protein.	0.884
A0A183KAH1	SCUD_LOCUS5434	A0A183KAH1	A0A183JRU5	AAA domain-containing protein.	Uncharacterized protein.	0.973
A0A183KAH1	SCUD_LOCUS5658	A0A183KAH1	A0A183JSG7	AAA domain-containing protein.	Uncharacterized protein.	0.970
A0A183KGA9	A0A183KAH1	A0A183KGA9	A0A183KAH1	Uncharacterized protein.	AAA domain-containing protein.	0.993
A0A183KGA9	A0A183KGN2	A0A183KGA9	A0A183KGN2	Uncharacterized protein.	Checkpoint protein; Belongs to the HUS1 family.	0.998
A0A183KGA9	A0A183KIU1	A0A183KGA9	A0A183KIU1	Uncharacterized protein.	Uncharacterized protein.	0.986
A0A183KGA9	A0A183KIV8	A0A183KGA9	A0A183KIV8	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A183KGA9	SCUD_LOCUS206	A0A183KGA9	A0A183JBZ9	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.975
A0A183KGA9	SCUD_LOCUS312	A0A183KGA9	A0A183JCA5	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A183KGA9	SCUD_LOCUS4326	A0A183KGA9	A0A183JNN9	Uncharacterized protein.	Uncharacterized protein.	0.772
A0A183KGA9	SCUD_LOCUS521	A0A183KGA9	A0A183JCW3	Uncharacterized protein.	Uncharacterized protein.	0.975
A0A183KGA9	SCUD_LOCUS5434	A0A183KGA9	A0A183JRU5	Uncharacterized protein.	Uncharacterized protein.	0.986
A0A183KGA9	SCUD_LOCUS5658	A0A183KGA9	A0A183JSG7	Uncharacterized protein.	Uncharacterized protein.	0.993