STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCUD_LOCUS5688Uncharacterized protein. (269 aa)    
Predicted Functional Partners:
SCUD_LOCUS789
2-Hacid_dh_C domain-containing protein.
   
 0.933
A0A183K711
2-Hacid_dh domain-containing protein.
   
 0.933
SCUD_LOCUS5439
2-Hacid_dh_C domain-containing protein.
   
 0.861
SCUD_LOCUS8142
THAP-type domain-containing protein.
   
 0.861
SCUD_LOCUS7470
Deacetylase sirtuin-type domain-containing protein.
    
 0.838
A0A183K5J8
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.804
A0A183KVL0
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.804
A0A183K8Y3
Uncharacterized protein.
    
 0.733
SCUD_LOCUS9854
Homeobox domain-containing protein.
    
 0.715
A0A183KHZ7
Uncharacterized protein.
    
 0.715
Your Current Organism:
Schistosoma curassoni
NCBI taxonomy Id: 6186
Other names: S. curassoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.