STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCUD_LOCUS5804Uncharacterized protein. (189 aa)    
Predicted Functional Partners:
SCUD_LOCUS9699
Uncharacterized protein.
    
   0.831
A0A183KM68
Uncharacterized protein.
    
   0.831
SCUD_LOCUS168
Nt_Gln_amidase domain-containing protein.
      
 0.703
A0A183KGJ2
Uncharacterized protein.
      
 0.658
A0A183KHH3
4F5 domain-containing protein.
   
  
 0.626
SCUD_LOCUS8433
GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
   
    0.619
A0A183K8S7
Proteasome subunit alpha type.
      
 0.465
A0A183K7B8
Uncharacterized protein.
   
    0.452
Your Current Organism:
Schistosoma curassoni
NCBI taxonomy Id: 6186
Other names: S. curassoni
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