STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCUD_LOCUS6553Uncharacterized protein. (126 aa)    
Predicted Functional Partners:
A0A183K9M8
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 0.989
SCUD_LOCUS7150
PX domain-containing protein.
   
 0.979
SCUD_LOCUS3998
Uncharacterized protein.
   
 0.961
A0A183KGY5
Uncharacterized protein.
   
 0.961
SCUD_LOCUS2161
PX domain-containing protein.
   
 0.915
A0A183KQI7
Vps5 domain-containing protein.
   
 
 0.873
A0A183KNI0
Rab-GAP TBC domain-containing protein.
   
 
 0.788
A0A183KBH0
Uncharacterized protein.
    
 0.736
A0A183KFF1
Uncharacterized protein.
    
 0.736
A0A183K6R3
Uncharacterized protein.
    
 
 0.656
Your Current Organism:
Schistosoma curassoni
NCBI taxonomy Id: 6186
Other names: S. curassoni
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