SCUD_LOCUS7845 protein (Schistosoma curassoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

SCUD_LOCUS7845

Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (110 aa)

Predicted Functional Partners:

SCUD_LOCUS5728

0.960

SCUD_LOCUS7124

0.951

SCUD_LOCUS8713

0.947

SCUD_LOCUS5883

0.934

A0A183K8F4

0.914

A0A183KS68

0.908

SCUD_LOCUS2076

0.888

SCUD_LOCUS3262

0.888

A0A183KED4

0.888

A0A183KSG3

0.888

Your Current Organism:

Schistosoma curassoni

NCBI taxonomy Id: 6186
Other names: S. curassoni

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183K8F4	A0A183KED4	A0A183K8F4	A0A183KED4	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein.	0.857
A0A183K8F4	A0A183KSG3	A0A183K8F4	A0A183KSG3	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.833
A0A183K8F4	SCUD_LOCUS2076	A0A183K8F4	A0A183JHA2	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	FZ domain-containing protein.	0.857
A0A183K8F4	SCUD_LOCUS3262	A0A183K8F4	A0A183JKN1	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.853
A0A183K8F4	SCUD_LOCUS5883	A0A183K8F4	A0A183JT43	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.877
A0A183K8F4	SCUD_LOCUS7845	A0A183K8F4	A0A183JYN9	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.914
A0A183K8F4	SCUD_LOCUS8713	A0A183K8F4	A0A183K150	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein kinase domain-containing protein.	0.943
A0A183KED4	A0A183K8F4	A0A183KED4	A0A183K8F4	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.857
A0A183KED4	A0A183KS68	A0A183KED4	A0A183KS68	Uncharacterized protein.	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.799
A0A183KED4	A0A183KSG3	A0A183KED4	A0A183KSG3	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.813
A0A183KED4	SCUD_LOCUS3262	A0A183KED4	A0A183JKN1	Uncharacterized protein.	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.813
A0A183KED4	SCUD_LOCUS5883	A0A183KED4	A0A183JT43	Uncharacterized protein.	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.857
A0A183KED4	SCUD_LOCUS7845	A0A183KED4	A0A183JYN9	Uncharacterized protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.888
A0A183KED4	SCUD_LOCUS8713	A0A183KED4	A0A183K150	Uncharacterized protein.	Protein kinase domain-containing protein.	0.869
A0A183KS68	A0A183KED4	A0A183KS68	A0A183KED4	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein.	0.799
A0A183KS68	SCUD_LOCUS2076	A0A183KS68	A0A183JHA2	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	FZ domain-containing protein.	0.799
A0A183KS68	SCUD_LOCUS5883	A0A183KS68	A0A183JT43	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.436
A0A183KS68	SCUD_LOCUS7845	A0A183KS68	A0A183JYN9	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.908
A0A183KS68	SCUD_LOCUS8713	A0A183KS68	A0A183K150	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein kinase domain-containing protein.	0.869
A0A183KSG3	A0A183K8F4	A0A183KSG3	A0A183K8F4	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.833