Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A183KJH1 | A0A183KQ39 | A0A183KJH1 | A0A183KQ39 | Uncharacterized protein. | Uncharacterized protein. | 0.619 |
A0A183KJH1 | A0A183KQ97 | A0A183KJH1 | A0A183KQ97 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.649 |
A0A183KJH1 | A0A183KVP6 | A0A183KJH1 | A0A183KVP6 | Uncharacterized protein. | POU domain protein. | 0.600 |
A0A183KJH1 | A0A183KZS9 | A0A183KJH1 | A0A183KZS9 | Uncharacterized protein. | Uncharacterized protein. | 0.649 |
A0A183KJH1 | SCUD_LOCUS1200 | A0A183KJH1 | A0A183JET6 | Uncharacterized protein. | Uncharacterized protein. | 0.686 |
A0A183KJH1 | SCUD_LOCUS494 | A0A183KJH1 | A0A183JCT6 | Uncharacterized protein. | Uncharacterized protein. | 0.686 |
A0A183KJH1 | SCUD_LOCUS5137 | A0A183KJH1 | A0A183JQZ8 | Uncharacterized protein. | HTH TFE/IIEalpha-type domain-containing protein. | 0.678 |
A0A183KJH1 | SCUD_LOCUS7227 | A0A183KJH1 | A0A183JWY2 | Uncharacterized protein. | Uncharacterized protein. | 0.655 |
A0A183KJH1 | SCUD_LOCUS8079 | A0A183KJH1 | A0A183JZC1 | Uncharacterized protein. | Uncharacterized protein. | 0.619 |
A0A183KJH1 | SCUD_LOCUS8085 | A0A183KJH1 | A0A183JZC7 | Uncharacterized protein. | Uncharacterized protein. | 0.692 |
A0A183KQ39 | A0A183KJH1 | A0A183KQ39 | A0A183KJH1 | Uncharacterized protein. | Uncharacterized protein. | 0.619 |
A0A183KQ39 | A0A183KQ97 | A0A183KQ39 | A0A183KQ97 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.645 |
A0A183KQ39 | A0A183KZS9 | A0A183KQ39 | A0A183KZS9 | Uncharacterized protein. | Uncharacterized protein. | 0.663 |
A0A183KQ39 | SCUD_LOCUS5137 | A0A183KQ39 | A0A183JQZ8 | Uncharacterized protein. | HTH TFE/IIEalpha-type domain-containing protein. | 0.661 |
A0A183KQ39 | SCUD_LOCUS8085 | A0A183KQ39 | A0A183JZC7 | Uncharacterized protein. | Uncharacterized protein. | 0.818 |
A0A183KQ97 | A0A183KJH1 | A0A183KQ97 | A0A183KJH1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein. | 0.649 |
A0A183KQ97 | A0A183KQ39 | A0A183KQ97 | A0A183KQ39 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein. | 0.645 |
A0A183KQ97 | A0A183KZS9 | A0A183KQ97 | A0A183KZS9 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein. | 0.829 |
A0A183KQ97 | SCUD_LOCUS5137 | A0A183KQ97 | A0A183JQZ8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | HTH TFE/IIEalpha-type domain-containing protein. | 0.968 |
A0A183KQ97 | SCUD_LOCUS7227 | A0A183KQ97 | A0A183JWY2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein. | 0.773 |
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