STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183KV19Uncharacterized protein. (542 aa)    
Predicted Functional Partners:
SCUD_LOCUS8651
Beta-Casp domain-containing protein.
   
 0.827
SCUD_LOCUS5999
Uncharacterized protein.
    
 0.808
SCUD_LOCUS7195
Uncharacterized protein.
   
 0.792
A0A183KVA1
Uncharacterized protein.
   
 0.792
A0A183K6Q0
RPOL4c domain-containing protein.
    
  0.766
A0A183KW99
RPOLD domain-containing protein.
    
  0.748
A0A183KBE2
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.744
SCUD_LOCUS611
Uncharacterized protein.
   
 0.740
SCUD_LOCUS3097
Uncharacterized protein.
   
 0.740
A0A183KIB5
Uncharacterized protein.
   
 0.740
Your Current Organism:
Schistosoma curassoni
NCBI taxonomy Id: 6186
Other names: S. curassoni
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