close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183QCT7RBR-type E3 ubiquitin transferase. (440 aa)    
Predicted Functional Partners:
A0A183RPS3
Ubiquitin-like domain-containing protein.
   
 0.969
A0A183R7H7
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.962
A0A183RCI3
Cullin domain-containing protein; Belongs to the cullin family.
    
 
 0.962
A0A183R221
Ubiquitin-like domain-containing protein.
   
 0.959
A0A183R1Y3
Ubiquitin-like domain-containing protein.
   
 0.956
A0A183QG25
Uncharacterized protein.
    
 0.939
A0A183R035
Uncharacterized protein.
    
 0.939
A0A183RXQ2
Ubiquitin-like domain-containing protein.
    
  0.918
A0A183RG85
Uncharacterized protein.
    
 0.917
A0A183RDQ8
RBR-type E3 ubiquitin transferase.
  
 
0.867
Your Current Organism:
Schistosoma rodhaini
NCBI taxonomy Id: 6188
Other names: S. rodhaini
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.