Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A183QDF5Uncharacterized protein. (131 aa)    
Predicted Functional Partners:
A0A183QT12
Uncharacterized protein.
    
 0.770
A0A183RGN0
Uncharacterized protein.
    
 0.770
A0A183RXI6
Uncharacterized protein.
    
 0.770
A0A183S1V3
Uncharacterized protein.
     
 0.762
A0A183QYI9
Rab-GAP TBC domain-containing protein.
    
 
 0.702
A0A183QU49
Uncharacterized protein.
     
 0.690
A0A183QJV5
Uncharacterized protein.
     
 0.606
A0A183QM98
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
     
  0.606
A0A183RVK3
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
     
 0.588
A0A183S254
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
     
 0.588
Your Current Organism:
Schistosoma rodhaini
NCBI taxonomy Id: 6188
Other names: S. rodhaini
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