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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183QET4SAP domain-containing protein. (451 aa)    
Predicted Functional Partners:
A0A183QF35
RRM domain-containing protein.
   
 0.977
A0A183QZF8
Uncharacterized protein.
   
 0.949
A0A183RU05
RRM domain-containing protein.
   
 0.949
A0A183QJF8
Tho2 domain-containing protein.
   
 0.944
A0A183RJD0
Uncharacterized protein.
    
 0.941
A0A183RUT8
Uncharacterized protein.
    
 0.941
A0A183RLB7
Uncharacterized protein.
   
 0.936
A0A183QL27
Uncharacterized protein.
    
 0.935
A0A183S6N3
Uncharacterized protein.
     
 0.876
A0A183QMU2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.866
Your Current Organism:
Schistosoma rodhaini
NCBI taxonomy Id: 6188
Other names: S. rodhaini
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