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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183QFD4Uncharacterized protein. (435 aa)    
Predicted Functional Partners:
A0A183QPF8
Uncharacterized protein.
   
 0.989
A0A183RHV2
MFAP1 domain-containing protein.
   
 0.985
A0A183R772
Matrin-type domain-containing protein.
    
 0.947
A0A183RI45
Uncharacterized protein.
   
 0.947
A0A183QJP6
Uncharacterized protein.
    
 0.912
A0A183QS14
Ubiquitin-like domain-containing protein.
    
 0.905
A0A183RLW8
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
  0.899
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 
 0.861
A0A183QKM1
Small nuclear ribonucleoprotein Sm D3.
   
 
 0.858
A0A183RPZ5
Sm domain-containing protein.
   
 
 0.837
Your Current Organism:
Schistosoma rodhaini
NCBI taxonomy Id: 6188
Other names: S. rodhaini
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