A0A183QII7 protein (Schistosoma rodhaini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A183QII7

Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (298 aa)

Predicted Functional Partners:

A0A183QZM9

0.972

A0A183QEG3

0.971

A0A183QMY0

0.956

A0A183QDS5

0.929

A0A183QFS3

0.929

A0A183QKJ6

0.929

A0A183S5B6

0.929

A0A183RDC3

0.926

A0A183R800

0.921

A0A183QN10

0.906

Your Current Organism:

Schistosoma rodhaini

NCBI taxonomy Id: 6188
Other names: S. rodhaini

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A183QDS5	A0A183QEG3	Uncharacterized protein.	Protein kinase domain-containing protein.	0.421
A0A183QDS5	A0A183QII7	Uncharacterized protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.929
A0A183QDS5	A0A183QKJ6	Uncharacterized protein.	Uncharacterized protein.	0.723
A0A183QDS5	A0A183QN10	Uncharacterized protein.	Uncharacterized protein.	0.427
A0A183QDS5	A0A183QZM9	Uncharacterized protein.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.495
A0A183QEG3	A0A183QDS5	Protein kinase domain-containing protein.	Uncharacterized protein.	0.421
A0A183QEG3	A0A183QFS3	Protein kinase domain-containing protein.	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.952
A0A183QEG3	A0A183QII7	Protein kinase domain-containing protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.971
A0A183QEG3	A0A183QKJ6	Protein kinase domain-containing protein.	Uncharacterized protein.	0.421
A0A183QEG3	A0A183QMY0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.881
A0A183QEG3	A0A183QN10	Protein kinase domain-containing protein.	Uncharacterized protein.	0.421
A0A183QEG3	A0A183R800	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.881
A0A183QEG3	A0A183RDC3	Protein kinase domain-containing protein.	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.952
A0A183QEG3	A0A183S5B6	Protein kinase domain-containing protein.	Frizzled domain-containing protein.	0.971
A0A183QFS3	A0A183QEG3	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein kinase domain-containing protein.	0.952
A0A183QFS3	A0A183QII7	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.929
A0A183QFS3	A0A183QMY0	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein.	0.934
A0A183QFS3	A0A183RDC3	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.906
A0A183QFS3	A0A183S5B6	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Frizzled domain-containing protein.	0.891
A0A183QII7	A0A183QDS5	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Uncharacterized protein.	0.929