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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183QIM1KH_dom_type_1 domain-containing protein. (87 aa)    
Predicted Functional Partners:
A0A183QNI4
RRM domain-containing protein.
   
 0.792
A0A183R827
RRM domain-containing protein.
   
 0.773
A0A183RP96
Nuclear cap-binding protein subunit 2.
    
 0.770
A0A183Q9X3
Uncharacterized protein.
   
 0.768
A0A183R7A1
RRM domain-containing protein.
   
 0.761
A0A183QSF2
Uncharacterized protein.
   
 0.739
A0A183QBV4
Uncharacterized protein.
   
 0.712
A0A183R8K0
Uncharacterized protein.
   
 0.710
A0A183REN4
MIF4G_like domain-containing protein.
   
 0.710
A0A183R1D6
zf-C2H2_jaz domain-containing protein.
    
   0.697
Your Current Organism:
Schistosoma rodhaini
NCBI taxonomy Id: 6188
Other names: S. rodhaini
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