Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A183QL07Uncharacterized protein. (115 aa)    
Predicted Functional Partners:
A0A183QSF2
Uncharacterized protein.
    
 0.756
A0A183QBV4
Uncharacterized protein.
    
 0.705
A0A183QQI6
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.693
A0A183RPZ5
Sm domain-containing protein.
    
 0.683
A0A183R930
Sm domain-containing protein.
    
 0.681
A0A183QKM1
Small nuclear ribonucleoprotein Sm D3.
    
 0.673
A0A183QPZ1
Uncharacterized protein.
    
 0.672
A0A183RP96
Nuclear cap-binding protein subunit 2.
    
 0.658
A0A183R827
RRM domain-containing protein.
   
 0.645
A0A183S4W3
RRM domain-containing protein.
    
 0.644
Your Current Organism:
Schistosoma rodhaini
NCBI taxonomy Id: 6188
Other names: S. rodhaini
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