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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183QNJ4RRM domain-containing protein. (123 aa)    
Predicted Functional Partners:
A0A183QIQ2
Uncharacterized protein.
   
 0.999
A0A183QQB3
Uncharacterized protein.
   
 0.999
A0A183RD42
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
   
 0.999
A0A183QPZ1
Uncharacterized protein.
    
 0.998
A0A183QQI6
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.997
A0A183RHW3
CPSF_A domain-containing protein.
    
 0.997
A0A183QU04
Uncharacterized protein.
    
 0.996
A0A183R734
SF3b1 domain-containing protein.
   
 0.995
A0A183RHK2
Uncharacterized protein.
   
 0.995
A0A183S3N7
SF3b1 domain-containing protein.
   
 0.995
Your Current Organism:
Schistosoma rodhaini
NCBI taxonomy Id: 6188
Other names: S. rodhaini
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