Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A183QPM7Uncharacterized protein. (550 aa)    
Predicted Functional Partners:
A0A183RRF0
Uncharacterized protein.
    
 
 0.633
A0A183S2V3
Uncharacterized protein.
    
 
 0.633
A0A183RFP0
Uncharacterized protein.
      
 0.580
A0A183QI33
Uncharacterized protein.
      
 0.577
A0A183S6B6
Uncharacterized protein.
      
 0.567
A0A183S2V0
Uncharacterized protein.
      
 0.566
A0A183QPR4
Uncharacterized protein.
 
      0.530
A0A183QZU7
USP domain-containing protein; Belongs to the peptidase C19 family.
      
 0.516
A0A183RQI8
N-acetyltransferase domain-containing protein.
      
 0.515
A0A183QEJ5
Uncharacterized protein.
    
 
 0.506
Your Current Organism:
Schistosoma rodhaini
NCBI taxonomy Id: 6188
Other names: S. rodhaini
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