Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A183QQ06Uncharacterized protein. (1481 aa)    
Predicted Functional Partners:
A0A183QEE2
Uncharacterized protein; Belongs to the actin family.
    
 0.998
A0A183QQY1
HMG box domain-containing protein.
   
 0.998
A0A183QGZ9
Uncharacterized protein.
    
 0.994
A0A183QIV5
SWIRM-assoc_2 domain-containing protein.
   
 0.993
A0A183QIV6
Uncharacterized protein.
   
 0.993
A0A183R286
Uncharacterized protein.
   
 0.993
A0A183R2E7
ARID domain-containing protein.
   
 0.993
A0A183RCB5
Uncharacterized protein.
   
 0.993
A0A183RMR9
Uncharacterized protein.
   
 0.993
A0A183R1C2
SWIB domain-containing protein.
   
 0.992
Your Current Organism:
Schistosoma rodhaini
NCBI taxonomy Id: 6188
Other names: S. rodhaini
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