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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183QSE0Uncharacterized protein. (207 aa)    
Predicted Functional Partners:
A0A183R899
ThiF domain-containing protein.
   
 
  0.440
A0A183RUM1
eRF1_1 domain-containing protein.
    
 
 0.434
A0A183QLE5
DRBM domain-containing protein.
    
 
 0.432
A0A183R6F6
IBR domain-containing protein.
     
 0.431
A0A183RDQ8
RBR-type E3 ubiquitin transferase.
     
 0.431
A0A183RLB4
Uncharacterized protein.
     
 0.431
A0A183RN11
Uncharacterized protein.
     
 0.431
A0A183RTW0
RING-type domain-containing protein.
     
 0.431
A0A183RWV6
Uncharacterized protein.
     
 0.431
A0A183RND8
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
     
 0.415
Your Current Organism:
Schistosoma rodhaini
NCBI taxonomy Id: 6188
Other names: S. rodhaini
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.