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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183QYA7DNA_ligase_A_N domain-containing protein. (184 aa)    
Predicted Functional Partners:
A0A183RCG6
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.990
A0A183QC18
XPGN domain-containing protein.
  
 0.962
A0A183RKJ8
XPGI domain-containing protein.
  
 0.962
A0A183QN04
Ku domain-containing protein.
   
 0.949
A0A183RSY0
DNA_LIGASE_A3 domain-containing protein; Belongs to the ATP-dependent DNA ligase family.
 
     0.925
A0A183QMW7
Uncharacterized protein.
   
 0.903
A0A183QWX8
Ku domain-containing protein.
   
 0.903
A0A183R2A5
Uncharacterized protein.
   
 0.890
A0A183RZB9
BRCT domain-containing protein.
   
 0.890
A0A183S4M8
XRCC1_N domain-containing protein.
   
 0.890
Your Current Organism:
Schistosoma rodhaini
NCBI taxonomy Id: 6188
Other names: S. rodhaini
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