STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
G3AIV9_SPAPNGeranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (327 aa)    
Predicted Functional Partners:
G3AFK3_SPAPN
Alpha subunit of geranylgeranyl transferase type 2.
    
 0.999
G3AIN6_SPAPN
GTP-binding protein SAS1.
    
 0.824
G3AFD6_SPAPN
Uncharacterized protein.
    
 0.819
G3AE90_SPAPN
WW domain-containing protein.
    
 0.777
G3AJX9_SPAPN
GTP-binding protein YPT32/YPT11.
    
 0.774
G3AF02_SPAPN
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 
 0.767
G3AJT2_SPAPN
Uncharacterized protein.
    
 0.697
G3ARX2_SPAPN
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
   
 0.681
G3AF01_SPAPN
Uncharacterized protein.
    
 0.679
G3AKH5_SPAPN
Uncharacterized protein.
    
 0.679
Your Current Organism:
Spathaspora passalidarum
NCBI taxonomy Id: 619300
Other names: S. passalidarum NRRL Y-27907, Spathaspora passalidarum NRRL Y-27907
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.