STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS47823.1Hypothetical protein. (389 aa)    
Predicted Functional Partners:
SIS47839.1
Hypothetical protein.
 
 
 
 0.872
SIS47830.1
Asparagine synthase (glutamine-hydrolysing).
 
     0.866
SIS47846.1
Exosortase A system-associated hydrolase 1/exosortase A system-associated hydrolase 2.
 
 
   0.852
SIS47802.1
Acetyltransferase (GNAT) domain-containing protein.
 
     0.808
SIS47813.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
       0.773
SIS47605.1
FemAB-related protein, PEP-CTERM system-associated.
  
     0.757
SIS47668.1
Probable O-glycosylation ligase, exosortase A-associated.
 
     0.757
SIS47979.1
Uncharacterised nucleotidyltransferase.
  
     0.756
SIS47655.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.747
SIS47972.1
Hpr(Ser) kinase/phosphatase.
  
     0.746
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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