STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS47830.1Asparagine synthase (glutamine-hydrolysing). (630 aa)    
Predicted Functional Partners:
SIS47823.1
Hypothetical protein.
 
     0.866
SIS47802.1
Acetyltransferase (GNAT) domain-containing protein.
 
     0.855
SIS43785.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.811
SIS47846.1
Exosortase A system-associated hydrolase 1/exosortase A system-associated hydrolase 2.
 
     0.810
SIS47813.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.785
SIS47860.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.781
SIS47638.1
Asparagine synthase (glutamine-hydrolysing).
  
  
 
0.765
SIS47668.1
Probable O-glycosylation ligase, exosortase A-associated.
 
    0.763
SIS47630.1
Sugar transferase, PEP-CTERM/EpsH1 system associated.
 
  
  0.752
SIS47839.1
Hypothetical protein.
 
   
 0.743
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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