STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS48013.1Uncharacterized conserved protein. (172 aa)    
Predicted Functional Partners:
SIS65762.1
Cu+-exporting ATPase.
 
   
 0.595
SIS65535.1
Cytochrome c553.
 
     0.590
SIS65776.1
Cytochrome C oxidase, cbb3-type, subunit III.
 
     0.586
SIS65858.1
Two-component system, OmpR family, heavy metal sensor histidine kinase CusS; Member of a two-component regulatory system.
 
     0.569
SIS65745.1
Protein of unknown function.
 
     0.526
SIS48007.1
Hypothetical protein.
       0.482
SIS65822.1
Copper-resistance protein, CopA family.
 
   
 0.475
SIS65809.1
Copper resistance protein B.
 
     0.460
SIS65615.1
Membrane fusion protein, Cu(I)/Ag(I) efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.434
SIS65632.1
Outer membrane protein TolC.
 
     0.429
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.