Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS40682.1 | SIS43785.1 | SAMN05421760_101144 | SAMN05421760_101541 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Glutamate synthase (NADPH/NADH) large chain. | 0.978 |
SIS40682.1 | SIS45075.1 | SAMN05421760_101144 | SAMN05421760_101699 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Homoserine dehydrogenase. | 0.945 |
SIS40682.1 | SIS59660.1 | SAMN05421760_101144 | SAMN05421760_102356 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Acetyltransferase. | 0.979 |
SIS40682.1 | bioA | SAMN05421760_101144 | SAMN05421760_1011080 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.815 |
SIS40682.1 | bioC | SAMN05421760_101144 | SAMN05421760_1011089 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | malonyl-CoA O-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | 0.835 |
SIS40682.1 | gcvP | SAMN05421760_101144 | SAMN05421760_105119 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.847 |
SIS43785.1 | SIS40682.1 | SAMN05421760_101541 | SAMN05421760_101144 | Glutamate synthase (NADPH/NADH) large chain. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.978 |
SIS43785.1 | SIS45075.1 | SAMN05421760_101541 | SAMN05421760_101699 | Glutamate synthase (NADPH/NADH) large chain. | Homoserine dehydrogenase. | 0.856 |
SIS43785.1 | SIS59660.1 | SAMN05421760_101541 | SAMN05421760_102356 | Glutamate synthase (NADPH/NADH) large chain. | Acetyltransferase. | 0.506 |
SIS43785.1 | bioA | SAMN05421760_101541 | SAMN05421760_1011080 | Glutamate synthase (NADPH/NADH) large chain. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.779 |
SIS43785.1 | gcvP | SAMN05421760_101541 | SAMN05421760_105119 | Glutamate synthase (NADPH/NADH) large chain. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.963 |
SIS45075.1 | SIS40682.1 | SAMN05421760_101699 | SAMN05421760_101144 | Homoserine dehydrogenase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.945 |
SIS45075.1 | SIS43785.1 | SAMN05421760_101699 | SAMN05421760_101541 | Homoserine dehydrogenase. | Glutamate synthase (NADPH/NADH) large chain. | 0.856 |
SIS45075.1 | bioA | SAMN05421760_101699 | SAMN05421760_1011080 | Homoserine dehydrogenase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.696 |
SIS45075.1 | bioC | SAMN05421760_101699 | SAMN05421760_1011089 | Homoserine dehydrogenase. | malonyl-CoA O-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | 0.751 |
SIS59660.1 | SIS40682.1 | SAMN05421760_102356 | SAMN05421760_101144 | Acetyltransferase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.979 |
SIS59660.1 | SIS43785.1 | SAMN05421760_102356 | SAMN05421760_101541 | Acetyltransferase. | Glutamate synthase (NADPH/NADH) large chain. | 0.506 |
SIS59660.1 | bioA | SAMN05421760_102356 | SAMN05421760_1011080 | Acetyltransferase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.687 |
SIS59660.1 | bioC | SAMN05421760_102356 | SAMN05421760_1011089 | Acetyltransferase. | malonyl-CoA O-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | 0.477 |
bioA | SIS40682.1 | SAMN05421760_1011080 | SAMN05421760_101144 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.815 |
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