STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS41145.1ABC-2 type transport system permease protein. (268 aa)    
Predicted Functional Partners:
SIS41153.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.976
SIS41161.1
PQQ-dependent catabolism-associated beta-propeller protein.
 
   
 0.956
SIS41170.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
   
 0.952
SIS94059.1
NitT/TauT family transport system substrate-binding protein.
 
     0.775
SIS41339.1
Alcohol dehydrogenase (cytochrome c).
 
     0.774
SIS41320.1
Cytochrome c-550 PedF.
 
     0.773
SIS94093.1
NitT/TauT family transport system permease protein.
 
     0.773
SIS41331.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
     0.761
SIS41094.1
Uncharacterized conserved protein, contains FIST_N domain.
  
     0.713
SIS82408.1
Ribosome-dependent ATPase.
  
 
 0.660
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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