STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS41601.1Cyd operon protein YbgT. (33 aa)    
Predicted Functional Partners:
SIS41609.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
 
 0.998
SIS41615.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
 
 0.998
SIS56957.1
Succinate dehydrogenase subunit B.
     
  0.499
SIS56977.1
Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
     
  0.499
SIS57019.1
Succinate dehydrogenase subunit C.
     
  0.499
SIS47089.1
Purine-binding chemotaxis protein CheW.
  
     0.476
SIS66305.1
DnaJ domain-containing protein.
  
     0.434
SIS41623.1
Sulfide:quinone oxidoreductase.
       0.419
SIS99393.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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