STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS44181.1TIGR01244 family protein. (140 aa)    
Predicted Functional Partners:
SIS44190.1
Glyoxylase, beta-lactamase superfamily II.
 
     0.900
SIS97585.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
    
  0.790
SIS41623.1
Sulfide:quinone oxidoreductase.
  
  0.762
SIS94710.1
Glutaredoxin-family domain-containing protein.
    
  0.654
SIS73042.1
Glyoxylase, beta-lactamase superfamily II.
 
     0.653
SIS44173.1
Hypothetical protein.
 
     0.639
SIS44165.1
Hypothetical protein.
 
     0.628
SIS81093.1
Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03.
   
 
  0.447
SIS73074.1
Sulfate permease, SulP family.
 
     0.418
SIS81320.1
Sulfate permease, SulP family.
 
     0.404
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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