STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS44409.1periplasmic/7TM domain sensor diguanylate cyclase. (727 aa)    
Predicted Functional Partners:
SIS99326.1
Hpt sensor hybrid histidine kinase.
 0.991
SIS75025.1
PAS domain S-box-containing protein.
 0.981
SIS79370.1
PAS domain S-box-containing protein.
 0.971
SIS92777.1
Two-component system, NarL family, sensor histidine kinase BarA.
 0.965
SIS75012.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.934
SIS46891.1
PAS domain S-box-containing protein.
  
 0.929
SIS44506.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.913
SIS79396.1
PAS domain S-box-containing protein.
 
 0.907
SIS96382.1
Diguanylate cyclase (GGDEF) domain-containing protein/hemerythrin-like metal-binding domain protein.
 
0.904
SIS66651.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.894
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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