STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS40189.13-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (408 aa)    
Predicted Functional Partners:
SIT10754.1
[acyl-carrier-protein] S-malonyltransferase.
 0.986
SIS40305.1
Beta-ketoacyl synthase, N-terminal domain.
 
 
 
 0.982
SIS40195.1
3-oxoacyl-[acyl-carrier protein] reductase.
  0.979
SIS40264.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
 
 0.976
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
 0.967
SIS40288.1
Acyl carrier protein.
 
 0.956
SIS40200.1
Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain.
  
 0.955
SIS40243.1
acyl-CoA thioester hydrolase.
 
  
 0.953
SIS40228.1
Predicted exporter.
 
     0.934
SIS40235.1
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
  
 0.932
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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