STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS46295.1Putrescine transport system substrate-binding protein. (115 aa)    
Predicted Functional Partners:
SIS46285.1
Putrescine transport system substrate-binding protein.
     0.994
SIS46323.1
Putrescine transport system permease protein.
 
 
 0.981
SIS46313.1
Putrescine transport system permease protein.
 
 
 0.967
potA-2
Putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.959
SIS44477.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.920
SIS66536.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.882
SIS44470.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.802
SIS66551.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.778
SIS90322.1
Putative spermidine/putrescine transport system substrate-binding protein.
  
     0.766
potA-3
Putative spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.744
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.