STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS46913.1CBS domain-containing protein. (609 aa)    
Predicted Functional Partners:
SIS46920.1
DNA polymerase-3 subunit epsilon.
 
 
  0.979
SIS46905.1
Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.934
SIS40682.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.831
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.825
SIS43785.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.823
SIS55683.1
DNA polymerase-3 subunit epsilon.
 
 
  0.785
SIS55835.1
DNA polymerase-3 subunit epsilon.
 
 
  0.785
SIS46898.1
Putative solute:sodium symporter small subunit.
 
     0.784
SIS46891.1
PAS domain S-box-containing protein.
 
  
 0.705
SIS44506.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
  0.663
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.