STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS54836.1Glycolate oxidase. (484 aa)    
Predicted Functional Partners:
SIS54804.1
Glycolate oxidase iron-sulfur subunit.
 
 0.975
SIS80941.1
L-lactate dehydrogenase complex protein LldE.
 
 0.918
SIS40682.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.913
SIS61444.1
Glycolate oxidase iron-sulfur subunit.
 
 0.895
SIS54819.1
Glycolate oxidase FAD binding subunit.
    
0.891
SIS43785.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.805
SIS42365.1
FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.
 
 0.761
SIS54858.1
Uncharacterized conserved protein GlcG, DUF336 family.
 
  
 0.723
glcB-2
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.719
SIS53343.1
Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.696
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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