STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS56639.1Protein of unknown function. (107 aa)    
Predicted Functional Partners:
SIS97400.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.770
SIS44506.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
  0.713
SIT02858.1
Phosphocarrier protein.
    
 0.704
SIS79816.1
Hypothetical protein.
  
     0.653
SIT00010.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
  
     0.623
SIT10169.1
Pilus assembly protein FimV.
  
     0.613
SIS91231.1
MJ0042 family finger-like domain-containing protein.
  
     0.612
SIS76006.1
Protein of unknown function.
  
     0.578
SIS43136.1
Protein TonB.
  
     0.566
SIS86292.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
  0.521
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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