Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS43136.1 | SIS44506.1 | SAMN05421760_101463 | SAMN05421760_101634 | Protein TonB. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.501 |
SIS43136.1 | SIS56639.1 | SAMN05421760_101463 | SAMN05421760_102196 | Protein TonB. | Protein of unknown function. | 0.566 |
SIS43136.1 | SIS76006.1 | SAMN05421760_101463 | SAMN05421760_104242 | Protein TonB. | Protein of unknown function. | 0.544 |
SIS43136.1 | SIS79816.1 | SAMN05421760_101463 | SAMN05421760_10571 | Protein TonB. | Hypothetical protein. | 0.458 |
SIS43136.1 | SIS86292.1 | SAMN05421760_101463 | SAMN05421760_106122 | Protein TonB. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.572 |
SIS43136.1 | SIS91231.1 | SAMN05421760_101463 | SAMN05421760_107127 | Protein TonB. | MJ0042 family finger-like domain-containing protein. | 0.763 |
SIS43136.1 | SIS97400.1 | SAMN05421760_101463 | SAMN05421760_109111 | Protein TonB. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.713 |
SIS43136.1 | SIT10169.1 | SAMN05421760_101463 | SAMN05421760_11518 | Protein TonB. | Pilus assembly protein FimV. | 0.743 |
SIS44506.1 | SIS43136.1 | SAMN05421760_101634 | SAMN05421760_101463 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Protein TonB. | 0.501 |
SIS44506.1 | SIS56639.1 | SAMN05421760_101634 | SAMN05421760_102196 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Protein of unknown function. | 0.713 |
SIS44506.1 | SIS86292.1 | SAMN05421760_101634 | SAMN05421760_106122 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.998 |
SIS56639.1 | SIS43136.1 | SAMN05421760_102196 | SAMN05421760_101463 | Protein of unknown function. | Protein TonB. | 0.566 |
SIS56639.1 | SIS44506.1 | SAMN05421760_102196 | SAMN05421760_101634 | Protein of unknown function. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.713 |
SIS56639.1 | SIS76006.1 | SAMN05421760_102196 | SAMN05421760_104242 | Protein of unknown function. | Protein of unknown function. | 0.578 |
SIS56639.1 | SIS79816.1 | SAMN05421760_102196 | SAMN05421760_10571 | Protein of unknown function. | Hypothetical protein. | 0.653 |
SIS56639.1 | SIS86292.1 | SAMN05421760_102196 | SAMN05421760_106122 | Protein of unknown function. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.521 |
SIS56639.1 | SIS91231.1 | SAMN05421760_102196 | SAMN05421760_107127 | Protein of unknown function. | MJ0042 family finger-like domain-containing protein. | 0.612 |
SIS56639.1 | SIS97400.1 | SAMN05421760_102196 | SAMN05421760_109111 | Protein of unknown function. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.770 |
SIS56639.1 | SIT00010.1 | SAMN05421760_102196 | SAMN05421760_11098 | Protein of unknown function. | Uncharacterized conserved protein, DUF58 family, contains vWF domain. | 0.623 |
SIS56639.1 | SIT02858.1 | SAMN05421760_102196 | SAMN05421760_111113 | Protein of unknown function. | Phosphocarrier protein. | 0.704 |
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