STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS60096.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
SIS62015.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
    0.818
SIS79243.1
Polyphosphate kinase 2, PA0141 family.
  
    0.816
SIS68871.1
Cytochrome c oxidase accessory protein FixG.
  
    0.795
SIS62030.1
Cytochrome c oxidase accessory protein FixG.
  
    0.794
SIS61162.1
Polyphosphate:AMP phosphotransferase.
   
    0.776
SIT07076.1
Cytochrome b.
  
     0.590
SIS61978.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
   
    0.562
SIS53731.1
Uncharacterized radical SAM protein YgiQ.
   
    0.556
SIT10641.1
Radical SAM superfamily protein.
   
    0.556
SIS62097.1
Coproporphyrinogen III oxidase, anaerobic; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.552
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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