STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS60612.1Zn-dependent protease (includes SpoIVFB). (360 aa)    
Predicted Functional Partners:
SIS60630.1
23S rRNA pseudouridine2604 synthase/16S rRNA pseudouridine516 synthase; Belongs to the pseudouridine synthase RsuA family.
       0.781
SIS60651.1
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain).
       0.554
SIS60937.1
2-keto-4-pentenoate hydratase.
  
     0.544
SIS61471.1
Tryptophan-rich conserved hypothetical protein.
  
     0.511
SIS73517.1
AraC-type DNA-binding protein.
  
     0.421
SIT11529.1
Hypothetical protein.
  
  
 0.415
SIS68765.1
Uncharacterized membrane-anchored protein.
  
     0.413
SIS82619.1
Hypothetical protein.
  
 
   0.411
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.